Topic: Sci News:Geographic Origins Located From DNA
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Wed 09/03/08 04:42 PM
http://www.sciencedaily.com/releases/2008/09/080902143324.htm


Person's Geographic Origins Located From DNA

ScienceDaily (Sep. 2, 2008) — One day soon, you may be able to pinpoint the geographic origins of your ancestors based on analysis of your DNA.


A study published online this week in Nature by an international team that included Cornell University researchers describes the use of DNA to predict the geographic origins of individuals from a sample of Europeans, often within a few hundred kilometers of where they were born.

"What we found is that within Europe, individuals with all four grandparents from a given region are slightly more similar genetically to one another, on average, than to individuals from more distant regions," said Carlos Bustamante, associate professor of biological statistics and computational biology at Cornell and the paper's senior author. John Novembre, an assistant professor in the University of California-Los Angeles' Department of Ecology and Evolution, was lead author of the study that also included researchers from GlaxoSmithKline, the University of Chicago and the University of Lausanne (Switzerland).

"When these minute differences are compounded across the whole of their genome, we have surprisingly high power to predict where in Europe they came from," Bustamante added.

This is one of the first studies to examine genome-wide patterns of genetic variation across a large sample of Europeans, and to use these data to predict ancestry. The methodology has wide-ranging implications for using DNA samples from unrelated individuals to identify genes underlying complex diseases, as well as forensics, personalized genomics and the study of recent human history.

Using data from a sample of almost 3,200 Europeans supplied by GlaxoSmithKline, the team analyzed more than 500,000 genetic points known as single nucleotide polymorphisms (SNPs), or minute sequence variations in DNA. The researchers focused its analysis on individuals for whom all the grandparents were believed to come from the same country. The team simplified and plotted the data, revealing that individuals with similar genetic structures clustered together on the plot in such a way that the major geographic features of Europe became distinguishable.

"What is really surprising is that when we summarize the data from 500,000 SNPs in just two dimensions, we see this striking map of Europe," said Novembre. "We can recognize the Iberian peninsula, the Italian peninsula, southeastern Europe, Turkey and Cyprus."

The resolution of the genetic map was so precise that the investigators were able to find genetic differences among the French, German and Italian-speaking Swiss individuals; with French speakers being more similar to the French, German speakers to Germans and Italian speakers to Italians.

Based on these observations, Novembre and colleagues from the University of Chicago developed a novel algorithm for classifying individuals geographically based on their patterns of DNA variation.

For well-sampled countries, this approach placed 50 percent of individuals within 310 kilometers (km) of their reported origin, and 90 percent within 700 km of their origin. Across all populations, 50 percent of individuals were placed within 540 km of their reported origin and 90 percent of individuals within 840 km. The findings excluded individuals with grandparents from different countries, since these were assigned locations between their grandparents' origins. Some next steps will be to infer origins for people with recent ancestry from multiple locations and to perform similar analyses for populations on other continents.

The study was funded by the Giorgi-Cavaglieri Foundation, the Swiss National Science Foundation, the National Science Foundation and the National Institutes of Health in the U.S., and GlaxoSmithKline.
Adapted from materials provided by Cornell University.
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Cornell University (2008, September 2). Person's Geographic Origins Located From DNA. ScienceDaily. Retrieved September 3, 2008, from http://www.sciencedaily.com­ /releases/2008/09/080902143324.htm

Lynann's photo
Wed 09/03/08 05:57 PM
Somewhat dated material here but it's interesting. Women carry a DNA string that is passed daughter to daughter and is traceable back to original eve's if you will.

Here's some interesting info about this.

18 DAUGHTERS OF A GENETIC EVE

Dr. Douglas C. Wallace and his colleagues at the Emory University School of Medicine in Atlanta constructed a world female genetic tree based on mitochondrial DNA. Dr. Wallace found that almost all American Indians have mtNDA that belong to lineages he named A, B, C and D. Europeans belong to lineages H through K and T through X. The split between the two main branches in the European tree suggests that modern humans reached Europe 39,000 to 51,000 years ago, Dr. Wallace calculates, a time that corresponds with the archaeological date of at least 35,000 years ago.

In Asia the ancestral lineage is known as M, with descendant branches E, F and G. In the Americas are lineages A through D. In Africa there is a single main lineage, known as L, which is divided into three branches. L3, the youngest branch, is common in East Africa and is believed to be the source of both the Asian and European lineages.

Dr. Wallace's mitochondrial DNA lineages are "haplogroups" but known as "daughters of Eve," because all of the lineages are branches of the trunk that stems from the mitochondrial Eve.

Dr. Wallace is now exploring the root of the mitochondrial tree. In the March 2000 American Journal of Human Genetics, he and colleagues identify the Vasikela Kung of the northwestern Kalahari desert in southern Africa as the population that lies nearest to the root of the human mtDNA tree. Another population that seems almost equally old is that of the Biaka pygmies of Central Africa.